Main Page: Difference between revisions
No edit summary |
No edit summary |
||
| Line 9: | Line 9: | ||
__TOC__ <!-- This magic word forces the Table of Contents to appear here --> | __TOC__ <!-- This magic word forces the Table of Contents to appear here --> | ||
== Key Features of CryoNAV == | |||
CryoNAV offers a robust suite of tools to support your cryo-EM research: | |||
* '''Sample & Experiment Management:''' Define and track sample preparation conditions and experimental parameters. | |||
* '''Tilt Series Data Collection & Import:''' Interface with microscopes, manage data collection, and import data from various sources. | |||
* '''Comprehensive Metadata Management:''' Automate metadata extraction, manually edit and annotate, and utilize advanced search and filtering. Includes management of search maps and thumbnails for grids and tilt series. | |||
* '''Data Visualization:''' View grid atlases, search maps, thumbnails, and inspect raw/processed data. | |||
* '''Secure Data Storage & Backup:''' Configure storage locations and implement best practices for data backup. | |||
* '''Integrated Data Processing:''' Manage processing pipelines and integrate with popular cryo-EM tools such as: | |||
** [[CryoNAV_IMOD_Integration|IMOD]] | |||
** [[CryoNAV_Dynamo_Integration|Dynamo]] | |||
** [[CryoNAV_CryoCARE_Integration|CryoCARE]] | |||
** [[CryoNAV_DeepDeWedge_Integration|DeepDeWedge]] | |||
** [[CryoNAV_CTFfind_Integration|CTFfind]] | |||
* '''Data Sharing, Uploading & Archiving:''' Export data, prepare datasets for online repositories (e.g., EMPIAR, EMDB), and manage long-term storage (LTS). | |||
== Getting Started == | |||
New to CryoNAV? Here are some quick links to get you started: | |||
* [[CryoNAV_Installation_Guide|Installation Guide]] | |||
* [[CryoNAV_Quick_Start_Guide|Quick Start Guide]] | |||
* [[CryoNAV_User_Interface_Overview|User Interface Overview]] | |||
* [[CryoNAV_Tutorials|Tutorials & Walkthroughs]] | |||
== Navigating This Wiki == | |||
Use the navigation menu (usually on the left or top of the page) to explore different sections of this wiki. Key areas include: | |||
* [[CryoNAV_Core_Concepts|Core Concepts & Workflow]] | |||
* [[CryoNAV_Modules_Features|CryoNAV Modules & Features]] (Detailed guides on specific functionalities) | |||
* [[CryoNAV_FAQ|FAQ & Troubleshooting]] | |||
* [[CryoNAV_Community_Support|Community & Support]] | |||
We hope this wiki helps you make the most of CryoNAV! | |||
== I. General Information == | == I. General Information == | ||
| Line 69: | Line 100: | ||
=== [[CryoNAV_Workshops|Workshops]] === | === [[CryoNAV_Workshops|Workshops]] === | ||
<!-- Create a page named 'CryoNAV_Workshops' for information on past or upcoming workshops. --> | <!-- Create a page named 'CryoNAV_Workshops' for information on past or upcoming workshops. --> | ||
<!-- Categories can help organize pages --> | <!-- Categories can help organize pages --> | ||
Revision as of 19:05, 20 June 2025
Welcome to the CryoNAV Wiki!
CryoNAV is a comprehensive software solution designed to streamline and manage the entire cryo-electron microscopy (cryo-EM) data lifecycle. This wiki serves as a guide for new and existing CryoNAV users, helping you navigate its features and effectively manage your cryo-EM projects from sample preparation to final archiving.
Whether you are setting up your first experiment, processing complex datasets, or managing long-term storage, CryoNAV provides the tools you need to enhance productivity and ensure data integrity.
Key Features of CryoNAV
CryoNAV offers a robust suite of tools to support your cryo-EM research:
- Sample & Experiment Management: Define and track sample preparation conditions and experimental parameters.
- Tilt Series Data Collection & Import: Interface with microscopes, manage data collection, and import data from various sources.
- Comprehensive Metadata Management: Automate metadata extraction, manually edit and annotate, and utilize advanced search and filtering. Includes management of search maps and thumbnails for grids and tilt series.
- Data Visualization: View grid atlases, search maps, thumbnails, and inspect raw/processed data.
- Secure Data Storage & Backup: Configure storage locations and implement best practices for data backup.
- Integrated Data Processing: Manage processing pipelines and integrate with popular cryo-EM tools such as:
- Data Sharing, Uploading & Archiving: Export data, prepare datasets for online repositories (e.g., EMPIAR, EMDB), and manage long-term storage (LTS).
Getting Started
New to CryoNAV? Here are some quick links to get you started:
Use the navigation menu (usually on the left or top of the page) to explore different sections of this wiki. Key areas include:
- Core Concepts & Workflow
- CryoNAV Modules & Features (Detailed guides on specific functionalities)
- FAQ & Troubleshooting
- Community & Support
We hope this wiki helps you make the most of CryoNAV!